USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: P31943 USC-OGP 2-DE database:  P31943 P31943 General information about the entry View entry in simple text format Entry name HNRH1_HUMAN Primary accession number P31943 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Heterogeneous nuclear ribonucleoprotein H; Short=hnRNP H; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;. Gene name Name=HNRNPH1 Synonyms=HNRPH, HNRPH1 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1158: pI=6.01; Mw=51660 SPOT OGP-1290: pI=6.61; Mw=24887 SPOT OGP-1292: pI=6.57; Mw=24593 Cross-references UniProtKB/Swiss-Prot P31943; HNRH1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name HNRH1_HUMAN Primary accession number P31943 Secondary accession number(s) B3KW86 D3DWQ2 Q6IBM4 Sequence was last modified on  January 23, 2007 (version 4) Annotations were last modified on  March 15, 2017 (version 189) Name and origin of the protein Description RecName: Full=Heterogeneous nuclear ribonucleoprotein H; Short=hnRNP H; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein H, N-terminally processed; Gene name Name=HNRNPH1 Synonyms=HNRPH, HNRPH1 Encoded on Name=HNRNPH1; Synonyms=HNRPH, HNRPH1 Keywords 3D-structure; Acetylation; Complete proteome; Direct protein sequencing; Methylation; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding; Spliceosome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL L22009; AAA91346.1; -; mRNA EMBL CR456778; CAG33059.1; -; mRNA EMBL AK124530; BAG54048.1; -; mRNA EMBL CH471165; EAW53807.1; -; Genomic_DNA EMBL CH471165; EAW53808.1; -; Genomic_DNA EMBL BC001348; AAH01348.1; -; mRNA CCDS CCDS4446.1; -; . PIR I39358; I39358; . RefSeq NP_001244222.1; NM_001257293.1; . RefSeq NP_005511.1; NM_005520.2; . RefSeq XP_016864904.1; XM_017009415.1; . RefSeq XP_016864905.1; XM_017009416.1; . RefSeq XP_016864906.1; XM_017009417.1; . UniGene Hs.604001; -; . PDB 2LXU; NMR; -; A=7-111 PDBsum 2LXU; -; . ProteinModelPortal P31943; -; . SMR P31943; -; . BioGrid 109428; 187; . IntAct P31943; 103; . MINT MINT-1160934; -; . STRING 9606.ENSP00000349168; -; . iPTMnet P31943; -; . PhosphoSitePlus P31943; -; . SwissPalm P31943; -; . BioMuta HNRNPH1; -; . DMDM 1710632; -; . REPRODUCTION-2DPAGE IPI00013881; -; . REPRODUCTION-2DPAGE P31943; -; . EPD P31943; -; . MaxQB P31943; -; . PaxDb P31943; -; . PeptideAtlas P31943; -; . PRIDE P31943; -; . Ensembl ENST00000356731; ENSP00000349168; ENSG00000169045; . Ensembl ENST00000393432; ENSP00000377082; ENSG00000169045; . Ensembl ENST00000442819; ENSP00000397797; ENSG00000169045; . GeneID 3187; -; . KEGG hsa:3187; -; . UCSC uc003mke.5; human; . CTD 3187; -; . DisGeNET 3187; -; . GeneCards HNRNPH1; -; . HGNC HGNC:5041; HNRNPH1; . HPA CAB032820; -; . HPA HPA000914; -; . HPA HPA001359; -; . HPA HPA016884; -; . MalaCards HNRNPH1; -; . MIM 601035; gene; . neXtProt NX_P31943; -; . OpenTargets ENSG00000169045; -; . Orphanet 99861; Precursor T-cell acute lymphoblastic leukemia; . PharmGKB PA162391284; -; . eggNOG KOG4211; Eukaryota; . eggNOG ENOG410Z6M0; LUCA; . GeneTree ENSGT00760000119102; -; . HOGENOM HOG000220896; -; . HOVERGEN HBG055557; -; . InParanoid P31943; -; . KO K12898; -; . PhylomeDB P31943; -; . TreeFam TF316157; -; . Reactome R-HSA-6803529; FGFR2 alternative splicing; . Reactome R-HSA-72163; mRNA Splicing - Major Pathway; . Reactome R-HSA-72203; Processing of Capped Intron-Containing Pre-mRNA; . ChiTaRS HNRNPH1; human; . GeneWiki HNRPH1; -; . GenomeRNAi 3187; -; . PRO PR:P31943; -; . Proteomes UP000005640; Chromosome 5; . Bgee ENSG00000169045; -; . CleanEx HS_HNRNPH1; -; . ExpressionAtlas P31943; baseline and differential; . Genevisible P31943; HS; . GO GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; IDA:HPA; . GO GO:0005634; C:nucleus; TAS:ProtInc; . GO GO:0000166; F:nucleotide binding; IEA:InterPro; . GO GO:0008266; F:poly(U) RNA binding; TAS:ProtInc; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome; . GO GO:0010467; P:gene expression; TAS:Reactome; . GO GO:0000398; P:mRNA splicing; via spliceosome; IC:UniProtKB GO GO:0043484; P:regulation of RNA splicing; IDA:UniProtKB; . GO GO:0006396; P:RNA processing; TAS:ProtInc; . Gene3D 3.30.70.330; -; 3; . InterPro IPR012677; Nucleotide-bd_a/b_plait; . InterPro IPR000504; RRM_dom; . InterPro IPR012996; Znf_CHHC; . Pfam PF00076; RRM_1; 3; . Pfam PF08080; zf-RNPHF; 1; . SMART SM00360; RRM; 3; . SUPFAM SSF54928; SSF54928; 3; . PROSITE PS50102; RRM; 3; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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